Plant cell processes (Glycine max)
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Description
Processes in a plant cell, starting from the light reactions of photosynthesis.
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Ontology Terms
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DataNodes
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| Name | Type | Database reference | Comment |
|---|---|---|---|
| 1,3-bisphosphoglycerate | Metabolite | ||
| 2-hydroxyethylthiamine pyrophosphate | Metabolite | ||
| 2-oxoglutarate | Metabolite | ||
| 2-phosphoglycerate | Metabolite | ||
| 2-phosphoglycolate | Metabolite | ||
| 3-keto-2-carboxyarabinitol-1,5-bisphosphate | Metabolite | ||
| 3-keto-2-dioxyarabinitol-1,5-bisphosphate | Metabolite | ||
| 3-phosphoglycerate | Metabolite | ||
| 5,10-methylenetetrahydrofolate | Metabolite | ||
| ADP | Metabolite | ||
| ATP | Metabolite | ||
| ATP synthase | Complex | 3.6.3.14 (BRENDA)  | |
| Acetyl-CoA | Metabolite | ||
| Acetyl-dihydrolipoamide | Metabolite | ||
| Aldolase | GeneProduct | ||
| Aldose 1-epimerase | GeneProduct | ||
| Amino acid translocator | Protein | ||
| Aminomethyltransferase | GeneProduct | ||
| CO2 | Metabolite | ||
| Calvin cycle | Pathway | ||
| Catalase | GeneProduct | ||
| Chlorophyll | Metabolite | ||
| Chlorophyll A0 | Metabolite | ||
| Coenzyme A | Metabolite | ||
| Cytochrome b6f | Complex | 1.10.9.1 (BRENDA) | |
| Cytochrome f | Protein | ||
| Dihydrolipoamide | Metabolite | ||
| Dihydrolipoamide dehydrogenase | GeneProduct | ||
| Dihydrolipoyl | Metabolite | ||
| Dihydrolipoyl transacetylase | GeneProduct | ||
| Dihydroxyacetone phosphate | Metabolite | ||
| Enolase | GeneProduct | ||
| Erythrose 4-phosphate | Metabolite | ||
| Fe-S complex Fa | Metabolite | ||
| Fe-S complex Fb | Metabolite | ||
| Fe-S complex Fx | Metabolite | ||
| Ferredoxin-NADP+ reductase | GeneProduct | ||
| Ferredoxin | Protein | IPR001041 (InterPro) | |
| Fructose 1,6-bisphosphatase | GeneProduct | ||
| Fructose 1,6-bisphosphate | Metabolite | ||
| Fructose 6-phosphate | Metabolite | ||
| Glucose-6-phosphatase | GeneProduct | ||
| Glucose-6-phosphate 1-epimerase | GeneProduct | ||
| Glucose-6-phosphate isomerase | GeneProduct | ||
| Glutamate-glyoxylate aminotransferase | GeneProduct | ||
| Glutamic acid | Metabolite | ||
| Glyceraldehyde 3-phosphate | Metabolite | ||
| Glyceraldehyde-3-phosphate dehydrogenase | GeneProduct | ||
| Glycerate | Metabolite | ||
| Glycerate kinase | GeneProduct | ||
| Glycine | Metabolite | ||
| Glycine cleavage | Pathway | ||
| Glycine dehydrogenase | GeneProduct | ||
| Glycine hydroxymethyltransferase | GeneProduct | ||
| Glycolaldehyde | Metabolite | ||
| Glycolate | Metabolite | ||
| Glycolate oxidase | GeneProduct | ||
| Glycolate-glycerate translocator | Protein | ||
| Glyoxylate | Metabolite | ||
| H+ | Metabolite | ||
| H-protein | Protein | ||
| H2O | Metabolite | ||
| H2O2 | Metabolite | ||
| Heme b(n) | Metabolite | ||
| Heme b(p) | Metabolite | ||
| Hexokinase | GeneProduct | ||
| Hydroxypyruvate | Metabolite | ||
| Hydroxypyruvate reductase | GeneProduct | ||
| Lactate | Metabolite | ||
| Lactate dehydrogenase | GeneProduct | ||
| Light-dependent reactions | Pathway | ||
| Light-harvesting complex | Complex | IPR001344 (InterPro) | |
| Light-harvesting proteins | Protein | ||
| Lipoamide | Metabolite | ||
| Lipoyl | Metabolite | ||
| Mitochondrion | Pathway | ||
| NAD+ | Metabolite | ||
| NADH | Metabolite | ||
| NADP+ | Metabolite | ||
| NADPH | Metabolite | ||
| NH3 | Metabolite | ||
| O | Metabolite | ||
| O2 | Metabolite | ||
| Oxygen-evolving complex | Complex | ||
| P680 reaction center | Complex | ||
| P700 reaction center | Complex | ||
| PPi | Metabolite | ||
| Pheophytin | Metabolite | ||
| Phosphoenolpyruvate | Metabolite | ||
| Phosphofructokinase | GeneProduct | ||
| Phosphoglycerate kinase | GeneProduct | ||
| Phosphoglycerate mutase | GeneProduct | ||
| Phosphoglycolate phosphatase | GeneProduct | ||
| Phosphopentose epimerase | GeneProduct | ||
| Phosphopentose isomerase | GeneProduct | ||
| Phosphoribulokinase | GeneProduct | ||
| Photons | |||
| Photosystem I | Complex | 1.97.1.12 (BRENDA) | |
| Photosystem II | Complex | 1.10.3.9 (BRENDA) | |
| Phylloquinone A1 | Metabolite | ||
| Pi | Metabolite | ||
| Plastocyanin | Protein | GLYMA06G02300 (Ensembl Plants) | |
| Plastoquinol | Metabolite | 3819-09-8 (CAS) | |
| Plastoquinone | Metabolite | 4299-57-4 (CAS) | |
| Pyruvate | Metabolite | ||
| Pyruvate dehydrogenase | GeneProduct | ||
| Pyruvate kinase | GeneProduct | ||
| Pyruvate translocase | GeneProduct | ||
| Quinone | Metabolite | 78919-13-8 (CAS) | |
| Ribose 5-phosphate | Metabolite | ||
| Ribulose 1,5-bisphosphate | Metabolite | ||
| Ribulose 5-phosphate | Metabolite | ||
| Rieske protein | Protein | GLYMA12G32580 (Ensembl Plants) | |
| RuBisCO | GeneProduct | ||
| S-Aminomethyldihydrolipoyl | Metabolite | ||
| Sedoheptulokinase | GeneProduct | ||
| Sedoheptulose | Metabolite | ||
| Sedoheptulose 1,7-bisphosphatase | GeneProduct | ||
| Sedoheptulose 1,7-bisphosphate | Metabolite | ||
| Sedoheptulose 7-phosphate | Metabolite | ||
| Semiquinone | Metabolite | ||
| Serine | Metabolite | ||
| Serine-glyoxylate transaminase | GeneProduct | ||
| Tetrahydrofolate | Metabolite | ||
| Thiamine pyrophosphate | Metabolite | ||
| Thioredoxin | Protein | ||
| Transketolase | GeneProduct | ||
| Triose phosphate isomerase | GeneProduct | ||
| Triose phosphate translocator | Protein | ||
| Xylulose 5-phosphate | Metabolite | ||
| e- | |||
| α-D-Glucose | Metabolite | ||
| α-D-Glucose 6-phosphate | Metabolite | ||
| β-D-Fructose 1,6-bisphosphate | Metabolite | ||
| β-D-Fructose 6-phosphate | Metabolite | ||
| β-D-Glucose | Metabolite | ||
| β-D-Glucose 6-phosphate | Metabolite |
Annotated Interactions
No annotated interactions
