Calvin cycle (Populus trichocarpa)
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Description
This plant pathway represents the Calvin cycle (chloroplast). The primary site of CO2 fixation in C3 plants. CO2 is fixated onto ribulose-1,5-bishosphate to produce 3-phosphoglycerate. Part of the 3-phosphoglycerate is exported to the glycolysis (WP2862) while the rest is regenerated into ribulose-1,5-bisphosphate. The process uses NADPH and ATP that have been generated by the photosynthetic electon transport chain (WP2861).
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Ontology Terms
Saving...Bibliography
- Bohler S, Sergeant K, Lefèvre I, Jolivet Y, Hoffmann L, Renaut J, Dizengremel P, Hausman JF; ''Differential impact of chronic ozone exposure on expanding and fully expanded poplar leaves.''; Tree Physiol, 2010 PubMed Europe PMC Scholia
History
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External references
DataNodes
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| Name | Type | Database reference | Comment |
|---|---|---|---|
| 1,3-bisphosphoglycerate | Metabolite | C00236 (KEGG Compound)  | |
| 3-phosphoglycerate | Metabolite | CHEBI:17050 (ChEBI) | |
| ADP | Metabolite | CHEBI:16761 (ChEBI) | |
| ATP | Metabolite | CHEBI:15422 (ChEBI) | |
| NADP+ | Metabolite | CHEBI:18009 (ChEBI) | |
| NADPH | Metabolite | CHEBI:16474 (ChEBI) | |
| RuBisCO activase | Protein | A9PFQ2 (Uniprot-TrEMBL) | |
| RuBisCO subunit binding | Protein | B9HQD5 (Uniprot-TrEMBL) | |
| RuBisCO | Protein | B9GXY0 (Uniprot-TrEMBL) | |
| aldolase | Protein | A9PJC9 (Uniprot-TrEMBL) | |
| carbon dioxide | Metabolite | CHEBI:16526 (ChEBI) | |
| carbonic acid | Metabolite | CHEBI:28976 (ChEBI) | |
| carbonic anhydrase | Protein | Q41088 (Uniprot-TrEMBL) | |
| dihydroxy-acetone phosphate | Metabolite | CHEBI:16108 (ChEBI) | |
| erythrose-4-phosphate | Metabolite | CHEBI:48153 (ChEBI) | |
| fructose-1,6-bisphosphatase | Protein | 3.1.3.11 (Enzyme Nomenclature) | |
| fructose-1,6-bisphosphate | Metabolite | ChEBI:32966 (ChEBI) | |
| fructose-6-phosphate | Metabolite | CHEBI:78697 (ChEBI) | |
| glyceraldehyde-3-phosphate dehydrogenase | Protein | Q9SNX8 (Uniprot-TrEMBL) | |
| glyceraldehyde-3-phosphate | Metabolite | CHEBI:17050 (ChEBI) | |
| phosphoglycerate kinase | Protein | B9HY29 (Uniprot-TrEMBL) | |
| phosphoribulokinase | Protein | B9GZT5 (Uniprot-TrEMBL) | |
| ribose-5-phosphate | Metabolite | CHEBI:17050 (ChEBI) | |
| ribulose-1,5-bisphosphate | Metabolite | CHEBI:17050 (ChEBI) | |
| ribulose-5-phosphate epimerase | Protein | 5.3.1.6 (Enzyme Nomenclature) | |
| ribulose-5-phosphate-3-epimerase | Protein | A9PIC8 (Uniprot-TrEMBL) | |
| ribulose-5-phosphate | Metabolite | CHEBI:17050 (ChEBI) | |
| sedoheptulose-1,7-bisphosphatase | Protein | 3.1.3.37 (Enzyme Nomenclature) | |
| sedoheptulose-1,7-bisphosphate | Metabolite | CHEBI:17969 (ChEBI) | |
| sedoheptulose-7-phosphate | Metabolite | CHEBI:15721 (ChEBI) | |
| transketolase | Protein | B9GPE7 (Uniprot-TrEMBL) | |
| xylulose-5-phosphate | Metabolite | CHEBI:16332 (ChEBI) |
Annotated Interactions
No annotated interactions
