Starch metabolism (Oryza sativa)
From WikiPathways
Description
This pathways describes the synthesis and degradation reactions of starch in the chloroplast.The metabolic link with the Calvin-Benson Cycle, Sucrose Metabolism and Glycolysis are indicated. The original pathway (http://wikipathways.org/pathways/WP2622.html) was lifted into Oryza sativa.
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DataNodes
| View all... |
| Name | Type | Database reference | Comment |
|---|---|---|---|
| ADG2 | Protein | Os03g0735000 (Ensembl)  | |
| ADP-glucose | Metabolite | HMDB0006557 (HMDB) | |
| ADP | Metabolite | C00008 (KEGG Compound) | |
| APL2 | Protein | Os07g0243200 (Ensembl) | |
| APL3 | Protein | Os01g0633100 (Ensembl) | |
| APS1 | Protein | Os09g0298200 (Ensembl) | |
| ATP | Metabolite | HMDB0000538 (HMDB) | |
| Calvin-Benson Cycle | Pathway | WP2619 (WikiPathways) | |
| FBP | Protein | Os03g0267300 (Ensembl) | |
| Glycolysis | Pathway | WP2621 (WikiPathways) | |
| H₂O | Metabolite | HMDB0002111 (HMDB) | |
| PGI1 | Protein | Os09g0465600 (Ensembl) | |
| PGMP | Protein | Os10g0189100 (Ensembl) | |
| PHS1 | Protein | Os03g0758100 (Ensembl) | |
| PPi | Metabolite | CHEBI:35782 (ChEBI) | |
| Pi | Metabolite | CHEBI:18367 (ChEBI) | |
| SS1 | Protein | Os06g0160700 (Ensembl) | |
| SS2 | Protein | Os10g0437600 (Ensembl) | |
| SS3 | Protein | Os08g0191433 (Ensembl) | |
| Sucrose Metabolism | Pathway | WP2623 (WikiPathways) | |
| fructose 1,6-bisphosphate | Metabolite | HMDB0001058 (HMDB) | |
| fructose 6-phosphate | Metabolite | HMDB0000124 (HMDB) | |
| glucose 1-phosphate | Metabolite | HMDB0001586 (HMDB) | |
| glucose 6-phosphate | Metabolite | HMDB0001401 (HMDB) | |
| starch | Metabolite | C00369 (KEGG Compound) |
Annotated Interactions
| View all... |
| Source | Target | Type | Database reference | Comment |
|---|---|---|---|---|
| ADP-glucose | starch | mim-conversion | R02421 (KEGG Reaction) | |
| ADP | Arrow | R02421 (KEGG Reaction) | ||
| ATP | R00948 (KEGG Reaction) | |||
| H₂O | R00762_p (KEGG Reaction) | |||
| PPi | mim-conversion | R00948 (KEGG Reaction) | ||
| Pi | Arrow | R00762_p (KEGG Reaction) | ||
| Pi | R02111 (KEGG Reaction) | |||
| fructose 1,6-bisphosphate | fructose 6-phosphate | mim-conversion | R00762_p (WikiPathways) | |
| fructose 6-phosphate | glucose 6-phosphate | mim-conversion | R02740_p (WikiPathways) | |
| glucose 1-phosphate | ADP-glucose | mim-conversion | R00948 (KEGG Reaction) | |
| glucose 1-phosphate | glucose 6-phosphate | mim-conversion | R00959_p (WikiPathways) | |
| glucose 1-phosphate | starch | R02111 (KEGG Reaction) | ||
| mim-conversion | R02111 (KEGG Reaction) | |||
| starch | R02421 (KEGG Reaction) |
