Endochondral ossification (Mus musculus)

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Description

Endochondral ossification is the process by which the embryonic cartilaginous model of most bones contributes to longitudinal growth and is gradually replaced by bone. During endochondral ossification, chondrocytes proliferate, undergo hypertrophy and die; the cartilage extracellular matrix they construct is then invaded by blood vessels, osteoclasts, bone marrow cells and osteoblasts, the last of which deposit bone on remnants of cartilage matrix. The sequential changes in chondrocyte behaviour are tightly regulated by both systemic factors and locally secreted factors, which act on receptors to effect intracellular signalling and activation of chondrocyte-selective transcription factors. Systemic factors that regulate the behaviour of chondrocytes in growth cartilage include growth hormone and thyroid hormone, and the local secreted factors include Indian hedgehog, parathyroid hormone-related peptide, fibroblast growth factors and components of the cartilage extracellular matrix. Transcription factors that play critical roles in regulation of chondrocyte gene expression under the control of these extracellular factors include Runx2, Sox9 and MEF2C. The invasion of cartilage matrix by the ossification front is dependent on its resorption by members of the matrix metalloproteinase family, as well as the presence of blood vessels and bone-resorbing osteoclast (Mackie et al.)

Comments

HomologyConvert 
This pathway was inferred from Homo sapiens pathway WP474(r29737) with a 94% conversion rate.

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Bibliography

  1. Belluoccio D, Bernardo BC, Rowley L, Bateman JF; ''A microarray approach for comparative expression profiling of the discrete maturation zones of mouse growth plate cartilage.''; Biochim Biophys Acta, 2008 PubMed Europe PMC Scholia
  2. Mackie EJ, Ahmed YA, Tatarczuch L, Chen KS, Mirams M; ''Endochondral ossification: how cartilage is converted into bone in the developing skeleton.''; Int J Biochem Cell Biol, 2008 PubMed Europe PMC Scholia

History

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CompareRevisionActionTimeUserComment
142032view08:13, 30 November 2025EgonwAdded another identifier
142031view08:10, 30 November 2025EgonwAdded a missing identifier
142002view12:56, 29 November 2025EgonwModified description
117880view10:21, 23 May 2021EweitzModified title
114026view15:29, 17 December 2020Fehrhartconnected lines
107195view14:28, 17 September 2019MaintBotChEBI identifier normalization
106849view13:32, 17 September 2019MaintBotHMDB identifier normalization
87973view13:17, 25 July 2016SusanOntology Term : 'regulatory pathway' added !
72216view12:55, 27 October 2013EgonwFixed the ChEBI database name.
72176view22:19, 25 October 2013AlexanderPicoAdded missing metabolite identifiers.
69106view18:12, 8 July 2013MaintBotUpdated to 2013 gpml schema
41292view00:22, 2 March 2011MaintBotRemoved redundant pathway information and comments
32869view21:22, 16 September 2009MaintBotAdded xrefs
32298view13:15, 15 August 2009MaintBotFixed text labels
31870view12:38, 14 August 2009MaintBotFixed group labels
31327view20:20, 13 August 2009MaintBotFixed text labels
30897view00:23, 30 July 2009MaintBotNew pathway

External references

DataNodes

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NameTypeDatabase referenceComment
AcanGeneProduct11595 (Entrez Gene)
Adamts1GeneProduct11504 (Entrez Gene)
Adamts4GeneProduct240913 (Entrez Gene)
Adamts5GeneProduct23794 (Entrez Gene)
Akt1GeneProduct11651 (Entrez Gene)
AlplGeneProduct11647 (Entrez Gene)
Bmp6GeneProduct12161 (Entrez Gene)
Bmp7GeneProduct12162 (Entrez Gene)
Bmpr1aGeneProduct12166 (Entrez Gene)
Cab39GeneProduct12283 (Entrez Gene)
Calm1GeneProduct12313 (Entrez Gene)
Cdkn1cGeneProduct12577 (Entrez Gene)
Chst11GeneProduct58250 (Entrez Gene)
Col10a1GeneProduct12813 (Entrez Gene)
Col2a1GeneProduct12824 (Entrez Gene)
Cst10GeneProduct58214 (Entrez Gene)
  • Taken as human homologue of mouse Cst10
  • PMID: 13679380
CtslGeneProduct13039 (Entrez Gene) Taken as homologue to mouse Cathepsin L (Ctsl)
Ddr2GeneProduct18214 (Entrez Gene)
Enpp1GeneProduct18605 (Entrez Gene)
Fgf18GeneProduct14172 (Entrez Gene)
Fgf2GeneProduct14173 (Entrez Gene)
Fgfr1GeneProduct14182 (Entrez Gene)
Fgfr3GeneProduct14184 (Entrez Gene)
FrzbGeneProduct20378 (Entrez Gene)
GhrGeneProduct14600 (Entrez Gene)
Gli3GeneProduct14634 (Entrez Gene)
Growth hormoneGeneProduct
Hdac4GeneProduct208727 (Entrez Gene)
Hmgcs1GeneProduct208715 (Entrez Gene)
Ift88GeneProduct21821 (Entrez Gene)
Igf1GeneProduct16000 (Entrez Gene)
Igf1rGeneProduct16001 (Entrez Gene)
Igf2GeneProduct16002 (Entrez Gene)
IhhGeneProduct16147 (Entrez Gene)
Kif3aGeneProduct16568 (Entrez Gene)
Mef2cGeneProduct17260 (Entrez Gene)
MgpGeneProduct17313 (Entrez Gene)
Mmp13GeneProduct17386 (Entrez Gene)
Mmp9GeneProduct17395 (Entrez Gene)
Nkx3-2GeneProduct12020 (Entrez Gene)
OxygenMetaboliteHMDB0001377 (HMDB)
PlatGeneProduct18791 (Entrez Gene)
PlauGeneProduct18792 (Entrez Gene)
PrkacaGeneProduct18747 (Entrez Gene)
Ptch1GeneProduct19206 (Entrez Gene)
PthGeneProduct19226 (Entrez Gene)
Pth1rGeneProduct19228 (Entrez Gene)
PthlhGeneProduct19227 (Entrez Gene)
Runx2GeneProduct12393 (Entrez Gene)
Runx3GeneProduct12399 (Entrez Gene)
ScinGeneProduct20259 (Entrez Gene) PMID: 17097081
Serpinh1GeneProduct12406 (Entrez Gene)
Slc38a2GeneProduct67760 (Entrez Gene)
Sox5GeneProduct20678 (Entrez Gene)
Sox6GeneProduct20679 (Entrez Gene)
Sox9GeneProduct20682 (Entrez Gene)
Spp1GeneProduct20750 (Entrez Gene)
Stat1GeneProduct20846 (Entrez Gene)
Stat5bGeneProduct20851 (Entrez Gene)
TNAPGeneProduct
Tgfb1GeneProduct21803 (Entrez Gene)
Tgfb2GeneProduct21808 (Entrez Gene)
ThraGeneProduct21833 (Entrez Gene)
Thyroid hormoneMetaboliteCHEBI:18332 (ChEBI) T4
Thyroid hormoneMetaboliteCHEBI:60311 (ChEBI)
Timp3GeneProduct21859 (Entrez Gene)
TriiodothyronineMetaboliteCHEBI:24864 (ChEBI)
VegfaGeneProduct22339 (Entrez Gene)
cAMPMetaboliteHMDB0000058 (HMDB)

Annotated Interactions

No annotated interactions
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