| Name | Type | Database reference | Comment | | AKT1 | GeneProduct | ENSG00000142208 (Ensembl)  |
| AKT2 | GeneProduct | ENSG00000105221 (Ensembl)  |
| AKT3 | GeneProduct | ENSG00000117020 (Ensembl)  |
| ARAF | GeneProduct | ENSG00000078061 (Ensembl)  |
| ARHGEF6 | GeneProduct | ENSG00000129675 (Ensembl)  |
| Apoptosis | Pathway | WP254 (WikiPathways)  |
| BAD | GeneProduct | ENSG00000002330 (Ensembl)  |
| BAK1 | GeneProduct | ENSG00000030110 (Ensembl)  |
| BAX | GeneProduct | ENSG00000087088 (Ensembl)  |
| BCL2L1 | GeneProduct | ENSG00000171552 (Ensembl)  |
| BRAF | GeneProduct | ENSG00000157764 (Ensembl)  |
| BRCA2 | GeneProduct | ENSG00000139618 (Ensembl)  |
| BUB1B-PAK6 | GeneProduct | ENSG00000259288 (Ensembl)  |
| CASP9 | GeneProduct | ENSG00000132906 (Ensembl)  |
| CCND1 | GeneProduct | ENSG00000110092 (Ensembl)  |
| CDC42 | GeneProduct | ENSG00000070831 (Ensembl)  |
| CDK4 | GeneProduct | ENSG00000135446 (Ensembl)  |
| CDK6 | GeneProduct | ENSG00000105810 (Ensembl)  |
| CDKN1A | GeneProduct | ENSG00000124762 (Ensembl)  |
| CDKN2A | GeneProduct | ENSG00000147889 (Ensembl)  |
| CHUK | GeneProduct | ENSG00000213341 (Ensembl)  |
| Cell cycle | Pathway | WP179 (WikiPathways)  |
| DDB2 | GeneProduct | ENSG00000134574 (Ensembl)  |
| E2F1 | GeneProduct | ENSG00000101412 (Ensembl)  |
| E2F2 | GeneProduct | ENSG00000007968 (Ensembl)  |
| E2F3 | GeneProduct | ENSG00000112242 (Ensembl)  |
| EGF | GeneProduct | ENSG00000138798 (Ensembl)  |
| EGFR | GeneProduct | ENSG00000146648 (Ensembl)  |
| ERBB2 | GeneProduct | ENSG00000141736 (Ensembl)  |
| G1/S Cell Cycle
Control | Pathway | WP45 (WikiPathways)  |
| GADD45A | GeneProduct | ENSG00000116717 (Ensembl)  |
| GADD45B | GeneProduct | ENSG00000099860 (Ensembl)  |
| GADD45G | GeneProduct | ENSG00000130222 (Ensembl)  |
| IKBKB | GeneProduct | ENSG00000104365 (Ensembl)  |
| IKBKG | GeneProduct | ENSG00000269335 (Ensembl)  |
| JAK1 | GeneProduct | ENSG00000162434 (Ensembl)  |
| KRAS | GeneProduct | ENSG00000133703 (Ensembl)  |
| MAP2K1 | GeneProduct | ENSG00000169032 (Ensembl)  |
| MAP2K2 | GeneProduct | ENSG00000126934 (Ensembl)  |
| MAPK10 | GeneProduct | ENSG00000109339 (Ensembl)  |
| MAPK1 | GeneProduct | ENSG00000100030 (Ensembl)  |
| MAPK3 | GeneProduct | ENSG00000102882 (Ensembl)  |
| MAPK8 | GeneProduct | ENSG00000107643 (Ensembl)  |
| MAPK9 | GeneProduct | ENSG00000050748 (Ensembl)  |
| MTOR | GeneProduct | ENSG00000198793 (Ensembl)  |
| NFKB1 | GeneProduct | ENSG00000109320 (Ensembl)  |
| PA | Metabolite | CHEBI:18879 (ChEBI)  |
| PAK1 | GeneProduct | ENSG00000149269 (Ensembl)  |
| PAK2 | GeneProduct | ENSG00000180370 (Ensembl)  |
| PAK3 | GeneProduct | ENSG00000077264 (Ensembl)  |
| PAK4 | GeneProduct | ENSG00000130669 (Ensembl)  |
| PAK5 | GeneProduct | ENSG00000101349 (Ensembl)  |
| PAK6 | GeneProduct | ENSG00000137843 (Ensembl)  |
| PI3K-Akt Signaling | Pathway | WP4172 (WikiPathways)  |
| PIK3CA | GeneProduct | ENSG00000121879 (Ensembl)  |
| PIK3CB | GeneProduct | ENSG00000051382 (Ensembl)  |
| PIK3CD | GeneProduct | ENSG00000171608 (Ensembl)  |
| PIK3R1 | GeneProduct | ENSG00000145675 (Ensembl)  |
| PIK3R2 | GeneProduct | ENSG00000105647 (Ensembl)  |
| PIK3R3 | GeneProduct | ENSG00000117461 (Ensembl)  |
| PIP3 | Metabolite | CHEBI:16618 (ChEBI)  |
| PLD1 | GeneProduct | ENSG00000075651 (Ensembl)  |
| POLK | GeneProduct | ENSG00000122008 (Ensembl)  |
| RAC1 | GeneProduct | ENSG00000136238 (Ensembl)  |
| RAC2 | GeneProduct | ENSG00000128340 (Ensembl)  |
| RAC3 | GeneProduct | ENSG00000169750 (Ensembl)  |
| RAD51 | GeneProduct | ENSG00000051180 (Ensembl)  |
| RAF1 | GeneProduct | ENSG00000132155 (Ensembl)  |
| RALA | GeneProduct | ENSG00000006451 (Ensembl)  |
| RALB | GeneProduct | ENSG00000144118 (Ensembl)  |
| RALBP1 | GeneProduct | ENSG00000017797 (Ensembl)  |
| RALGDS | GeneProduct | ENSG00000160271 (Ensembl)  |
| RB1 | GeneProduct | ENSG00000139687 (Ensembl)  |
| RELA | GeneProduct | 5970 (Entrez Gene)  |
| RHOA | GeneProduct | ENSG00000067560 (Ensembl)  |
| RPS6KB1 | GeneProduct | ENSG00000108443 (Ensembl)  |
| RPS6KB2 | GeneProduct | ENSG00000175634 (Ensembl)  |
| SMAD2 | GeneProduct | ENSG00000175387 (Ensembl)  |
| SMAD3 | GeneProduct | ENSG00000166949 (Ensembl)  |
| SMAD4 | GeneProduct | ENSG00000141646 (Ensembl)  |
| STAT1 | GeneProduct | ENSG00000115415 (Ensembl)  |
| STAT3 | GeneProduct | ENSG00000168610 (Ensembl)  |
| TGFA | GeneProduct | ENSG00000163235 (Ensembl)  |
| TGFB1 | GeneProduct | ENSG00000105329 (Ensembl)  |
| TGFB2 | GeneProduct | ENSG00000092969 (Ensembl)  |
| TGFB3 | GeneProduct | ENSG00000119699 (Ensembl)  |
| TGFBR1 | GeneProduct | ENSG00000106799 (Ensembl)  |
| TGFBR2 | GeneProduct | ENSG00000163513 (Ensembl)  |
| TGFb Signaling
Pathway | Pathway | |
| TIAM1 | GeneProduct | ENSG00000156299 (Ensembl)  |
| TP53 | GeneProduct | ENSG00000141510 (Ensembl)  |
| VEGF Signaling
Pathway | Pathway | |
| VEGFA | GeneProduct | ENSG00000112715 (Ensembl)  |