WikiPathways

From WikiPathways

(Difference between revisions)
Jump to: navigation, search
(rearranged blue panel)
Current revision (15:33, 11 April 2026) (view source)
 
(412 intermediate revisions not shown.)
Line 1: Line 1:
-
__NOEDITSECTION__ <!-- Turn off section editing -->
 
-
__NOTOC__ <!-- Turn off Table of Contents  -->
 
-
 
{|  
{|  
<!-- Special Notice Section-->
<!-- Special Notice Section-->
-
<!-- TECHNICAL DIFFICULTIES -->
 
-
<!--|-valign="top"
 
-
|colspan="8"|<div class="frontPagePanel yellowBg" style="width:95%;margin:1em;width=100%">
 
-
<h2 class="frontPagePanel yellowFg">2015-Sep-01: Technical issues.</h2>
 
-
<font size=2>'''We are currently experiencing some technical issues, so some pages are not accessible. We are working hard to fix those issues. Sorry for any inconveniences.'''</font></div>-->
 
-
<!-- SURVEY -->
 
<!--
<!--
|-valign="top"
|-valign="top"
|colspan="8"|<div class="frontPagePanel yellowBg" style="width:95%;margin:1em;width=100%">
|colspan="8"|<div class="frontPagePanel yellowBg" style="width:95%;margin:1em;width=100%">
-
<h2 class="frontPagePanel yellowFg">We want your feedback! A quick survey to help us focus development and renew funding.  [https://www.surveymonkey.com/r/wikipathways https://www.surveymonkey.com/r/wikipathways]</h2></div>  
+
<h2 class="frontPagePanel yellowFg">11 April 2019: Scheduled Downtime</h2>
 +
<font size=2>'''We will be taking the site down for an hour at 24:00UTC on April 11th. We are switching over to new and improved infrastructure! Sorry for any inconveniences.'''</font></div>
-->
-->
-
<!-- CC0 ANNOUNCEMENT -->
+
 
 +
<!-- TECHNICAL DIFFICULTIES -->
 +
<!--
|-valign="top"
|-valign="top"
|colspan="8"|<div class="frontPagePanel yellowBg" style="width:95%;margin:1em;width=100%">
|colspan="8"|<div class="frontPagePanel yellowBg" style="width:95%;margin:1em;width=100%">
-
<h2 class="frontPagePanel yellowFg">We made the switch to CC0 for the most unrestricted access possible. [[WikiPathways:CC0_Announcement|Read all about it...]]</h2></div>  
+
<h2 class="frontPagePanel yellowFg">2015-Sep-01: Technical issues.</h2>
-
<!-- PAGE CONTENT -->
+
<font size=2>'''We are currently experiencing some technical issues, so some pages are not accessible. We are working hard to fix those issues. Sorry for any inconveniences.'''</font></div>
 +
-->
 +
 
 +
<!-- ANNOUNCEMENTS -->
 +
<!--
 +
|-valign="top" align="center"
 +
|colspan="8"|<div class="frontPagePanel redBg" style="width:95%;margin:1em;width=100%">
 +
<h2 class="frontPagePanel redFg">Share your pathway knowledge in the fight against COVID-19</h2>
 +
<font size=2>'''''ACCESS'' the rapidly growing [[Portal:COVID-19|collection of COVID-19 pathways]], ''CONTRIBUTE'' your time and domain knowledge about pathway biology as a [[Help:Authors|pathway author]], and ''USE'' these pathways in [[Help:Tools_using_WikiPathways|your research]].'''</font></div>  
 +
-->
 +
 
 +
<!-- Page Content -->
|-valign="top"
|-valign="top"
|<div class="frontPagePanel greenBg" style="width:95%;margin:1em;width=100%">
|<div class="frontPagePanel greenBg" style="width:95%;margin:1em;width=100%">
-
<h2 class="frontPagePanel greenFg">Welcome to WikiPathways <sup>BETA</sup></h2>
+
<h2 class="frontPagePanel greenFg">This website is now Read-Only</h2>
-
<font size=2>'''WikiPathways is a database of biological pathways maintained by and for the scientific community.'''</font></div>
+
<font size=2>'''Visit https://wikipathways.org to see the new version of WikiPathways.''' This is the "classic" version of WikiPathways will shutdown on May 1st.<br />
 +
<b>Webservice users</b>: If you are still using the old web service, please [https://github.com/wikipathways/wikipathways-help/discussions contact us immediately] so we can help you transition.<br />
 +
<b>Curators</b>: PathVisio upload is temporarily unavailable. Please [https://github.com/wikipathways/wikipathways-help/discussions reach out] if you need to upload or update a pathway.
 +
</font></div>
<div class="frontPagePanel yellowBg" style="width:95%;margin:1em;width=100%">
<div class="frontPagePanel yellowBg" style="width:95%;margin:1em;width=100%">
Line 63: Line 71:
{|style="width:100%;" border="0" valign="top" cellspacing="2" cellpadding="1" align="center"
{|style="width:100%;" border="0" valign="top" cellspacing="2" cellpadding="1" align="center"
|-
|-
-
|rowspan="1" align="center" style="width:4%;"|
+
|rowspan="1" align="center" style="width:25%;"|
-
|rowspan="1" align="center" valign="top" style="width:45%;"|<big>'''Sandbox'''</big>{{#imgLink:Sandbox_thumb_200.jpg|200|center||pathway|WP4|Sandbox}}
+
|align="center" valign="top"|<big>'''Learn'''</big>{{#imgLink:AcademyPath.png|200|center||external|http://academy.wikipathways.org|WikiPathways Academy}}
'''Play with the editor tools'''
'''Play with the editor tools'''
-
|rowspan="1" align="center" style="width:4%;"|
+
|rowspan="1" align="center" style="width:25%;"|
-
|rowspan="1" align="center" style="width:1%;"|
+
|rowspan="1" align="center" style="width:25%;"|
-
|align="left" valign="top" style="width:45%;"|
+
|align="center" valign="top"|<big>'''Request'''</big>{{#imgLink:RequestForm2.png|210|center||external|https://github.com/wikipathways/pathway-curation-tasks/issues|Figure Conversion}}
-
'''Check out the following pages:'''<br>
+
'''Queue figures for conversion'''
-
* [[Help:Overview | Overview]]
+
|rowspan="1" align="center" style="width:25%;"|
-
* [[Special:RecentPathwayChanges | Recent changes]]
+
-
* [[Special:NewPathwaysPage | New pathways]]
+
-
* [[Special:SpecialWishList | Pathway wish list]]
+
-
* [http://wikipathways.tumblr.com/ WikiPathways Blog].
+
-
'''For more information see our [[Help:Contents |Help topics]]'''
+
-
|rowspan="1" align="center" style="width:1%;"|
+
|-
|-
|colspan="7"|
|colspan="7"|
Line 86: Line 88:
| valign="top"|
| valign="top"|
<div class="frontPagePanel blueBg" style="width:90%;margin:1em;width=100%;">
<div class="frontPagePanel blueBg" style="width:90%;margin:1em;width=100%;">
-
<h2 class="frontPagePanel blueFg">Today's Featured Pathway</h2>{{ #pathwayOfTheDay: {{LOCALDAYNAME}} {{LOCALDAY}} {{LOCALMONTHNAME}} {{LOCALYEAR}} | Curation:FeaturedPathway | true}}
+
<!--<h2 class="frontPagePanel blueFg">Today's Featured Pathway</h2>{{ #pathwayOfTheDay: {{LOCALDAYNAME}} {{LOCALDAY}} {{LOCALMONTHNAME}} {{LOCALYEAR}} | Curation:CurrentHighlight | true}} -->
-
<h2 class="frontPagePanel blueFg">Curator of the Week</h2><rss>https://wikipathways.github.io/academy/curators/curators_list.xml|max=1</rss>
+
<h2 class="frontPagePanel blueFg" style="margin-top:0.5em;">Updates</h2>
-
<h2 class="frontPagePanel blueFg">Updates</h2>
+
* '''This is the "classic" version of WikiPathways will shutdown on May 1st and is now read-only.'''
-
* '''June 2017 Release''': 124 edits by 21 contributors, and 6 new pathways this month
+
* '''April 2026 Release''': [[Special:RecentPathwayChanges|71 edits]] by [[WikiPathways:Statistics#Contribution_scores|7 contributors]] and [https://www.wikipathways.org/browse/new.html 2 new pathways].
-
* '''April 2017 Release''': 80 edits by 8 contributors this month
+
* '''March 2026 Release''': [[Special:RecentPathwayChanges|45 edits]] by [[WikiPathways:Statistics#Contribution_scores|5 contributors]] and [https://www.wikipathways.org/browse/new.html no new pathways].
-
* '''March 2017 Release''': 54 edits by 10 contributors this month
+
* '''February 2026 Release''': [[Special:RecentPathwayChanges|95 edits]] by [[WikiPathways:Statistics#Contribution_scores|9 contributors]] and [https://www.wikipathways.org/browse/new.html no new pathways].
-
* '''February 2017 Release''': 56 edits by 8 contributors this month
+
* '''January 2026 Release''': [[Special:RecentPathwayChanges|134 edits]] by [[WikiPathways:Statistics#Contribution_scores|3 contributors]] and [https://www.wikipathways.org/browse/new.html no new pathways].
-
* February 2: Rett syndrome pathway is now live at [https://en.wikipedia.org/wiki/Rett_syndrome#Interactive_pathway_map Wikipedia]
+
* '''December 2025 Release''': [[Special:RecentPathwayChanges|840 edits]] by [[WikiPathways:Statistics#Contribution_scores|8 contributors]] and [https://www.wikipathways.org/browse/new.html 9 new pathways].
-
* '''January 2017 Release''': 25 new human pathways with 181 new genes
+
* '''November 2025 Release''': [[Special:RecentPathwayChanges|686 edits]] by [[WikiPathways:Statistics#Contribution_scores|6 contributors]] and [https://www.wikipathways.org/browse/new.html 10 new pathways].
-
&nbsp;&nbsp;&nbsp;&nbsp;[[WikiPathways:Updates|more...]]
+
* '''October 2025 Release''': [[Special:RecentPathwayChanges|129 edits]] by [[WikiPathways:Statistics#Contribution_scores|10 contributors]] and [https://www.wikipathways.org/browse/new.html 5 new pathways].
<h2 class="frontPagePanel blueFg">Discussions</h2><recentChanges class="blueBg" style="border:none" namespace='90' limit='2'></recentChanges>&nbsp;&nbsp;&nbsp;&nbsp;[[WikiPathways:Discussions|more...]]
<h2 class="frontPagePanel blueFg">Discussions</h2><recentChanges class="blueBg" style="border:none" namespace='90' limit='2'></recentChanges>&nbsp;&nbsp;&nbsp;&nbsp;[[WikiPathways:Discussions|more...]]
<h2 class="frontPagePanel blueFg">Forum</h2><rss>https://groups.google.com/group/wikipathways-discuss/feed/rss_v2_0_msgs.xml|short|max=2</rss>&nbsp;&nbsp;&nbsp;&nbsp;[http://groups.google.com/group/wikipathways-discuss Google group wikipathways-discuss]
<h2 class="frontPagePanel blueFg">Forum</h2><rss>https://groups.google.com/group/wikipathways-discuss/feed/rss_v2_0_msgs.xml|short|max=2</rss>&nbsp;&nbsp;&nbsp;&nbsp;[http://groups.google.com/group/wikipathways-discuss Google group wikipathways-discuss]
Line 101: Line 103:
</div>
</div>
|}
|}
 +
 +
__NOEDITSECTION__ <!-- Turn off section editing -->
 +
__NOTOC__ <!-- Turn off Table of Contents  -->

Current revision

This website is now Read-Only

Visit https://wikipathways.org to see the new version of WikiPathways. This is the "classic" version of WikiPathways will shutdown on May 1st.
Webservice users: If you are still using the old web service, please contact us immediately so we can help you transition.
Curators: PathVisio upload is temporarily unavailable. Please reach out if you need to upload or update a pathway.

Find Pathways

Search

Browse

Browse by species and category

You can search by:
  • Pathway name (Apoptosis)
  • Gene or protein name (p53)
  • Any page content (cancer)

Get Pathways

Download

Multiple formats and methods

Growth

New pathways added each month

Edit Pathways

Learn

Play with the editor tools

Request

Queue figures for conversion


Updates

Discussions

No recent changes    more...

Forum

        Google group wikipathways-discuss


    Personal tools