WikiPathways:About - Revision history

AlexanderPico: added link to community event policy

AlexanderPico — Mon, 24 Sep 2018 18:20:55 GMT

added link to community event policy

←Older revision		Revision as of 18:20, 24 September 2018
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	* http://svn.bigcat.unimaas.nl/pathvisio/trunk/src/wikipathways/		* http://svn.bigcat.unimaas.nl/pathvisio/trunk/src/wikipathways/

-	== ~~Funding and Support~~ ==	+	== Community Event Guidelines ==
		+	WikiPathways is dedicated to providing a harassment-free and inclusive event experience for everyone. Please review [[WikiPathways:Event_Guidelines\|our event policy]] if you plan to pariticpate in any online or in-person event hosted by WikiPathways.

		+	== Funding and Support ==
	An overview of projects that has financially support WikiPathways is provided on the [[WikiPathways:Funding and Support]] page.		An overview of projects that has financially support WikiPathways is provided on the [[WikiPathways:Funding and Support]] page.

MaintBot: /* Why Pathways */

MaintBot — Fri, 01 Sep 2017 20:22:30 GMT

Why Pathways

←Older revision		Revision as of 20:22, 1 September 2017
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	== Why Pathways ==		== Why Pathways ==
-	~~Strictly speaking, one could argue that pathways don't exist... there are only networks. Nonetheless, pathways ''are'' useful.~~ Biological pathways provide intuitive views of the myriad of interactions underlying biological processes. A typical signaling pathway, for example, can represent receptor-binding events, protein complexes, phosphorylation reactions, translocations and transcriptional regulation, with only a minimal set of symbols, lines and arrows. These powerful representations are essential tools, common among the textbooks and review articles that document any given field of biology. Making these tools available for computational methods of analysis will allow researchers to connect pathways to databases of biological annotations and experimental data, creating effective products of systems biology. Collecting and maintaining pathway information in a robust database, however, is an ongoing challenge.	+	Biological pathways provide intuitive views of the myriad of interactions underlying biological processes. A typical signaling pathway, for example, can represent receptor-binding events, protein complexes, phosphorylation reactions, translocations and transcriptional regulation, with only a minimal set of symbols, lines and arrows. These powerful representations are essential tools, common among the textbooks and review articles that document any given field of biology. Making these tools available for computational methods of analysis will allow researchers to connect pathways to databases of biological annotations and experimental data, creating effective products of systems biology. Collecting and maintaining pathway information in a robust database, however, is an ongoing challenge.

	== How Does it Work ==		== How Does it Work ==

Khanspers: /* Open Access and Open Source */ removed applet wording

Khanspers — Wed, 03 May 2017 20:51:22 GMT

Open Access and Open Source: removed applet wording

←Older revision		Revision as of 20:51, 3 May 2017
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	== Open Access and Open Source ==		== Open Access and Open Source ==
-	We are committed to [[wikipedia:open access\|open access]] and [[wikipedia:open source\|open source]]. All content is available under our [[WikiPathways:License_Terms\|license terms]]. All source code for WikiPathways ~~and the PathVisio applet~~ is available under the [http://www.apache.org/licenses/ Apache License, Version 2.0].	+	We are committed to [[wikipedia:open access\|open access]] and [[wikipedia:open source\|open source]]. All content is available under our [[WikiPathways:License_Terms\|license terms]]. All source code for WikiPathways is available under the [http://www.apache.org/licenses/ Apache License, Version 2.0].
	* http://svn.bigcat.unimaas.nl/wikipathways/trunk/		* http://svn.bigcat.unimaas.nl/wikipathways/trunk/
	* http://svn.bigcat.unimaas.nl/pathvisio/trunk/src/wikipathways/		* http://svn.bigcat.unimaas.nl/pathvisio/trunk/src/wikipathways/

MaintBot: /* Funding and Support */

MaintBot — Thu, 18 Aug 2016 11:15:53 GMT

Funding and Support

←Older revision		Revision as of 11:15, 18 August 2016
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	== Funding and Support ==		== Funding and Support ==
-	* The BioRange program of ~~the [http://www.nbic.nl Netherlands Bioinformatics Centre (NBIC)].~~	+
-	* The WikiPathways ~~project~~ is ~~funded by~~ the [~~http://www.nigms.nih.gov/ National Institute for General Medical Sciences] (R01-GM100039)~~	+	An overview of projects that has financially support WikiPathways is provided on the [[WikiPathways:Funding and Support]] page.
-	* The WikiPathways ~~project is also funded by the [http~~:~~//nrnb.org National Resource for Network Biology~~] ~~(P41 GM103504).~~	+
-	* [http://code.google.com/soc Google Summer of Code] ~~has supported a number of students working on WikiPathways~~	+
-	* [http://www.~~unimaas.nl/default.asp?taal=en University Maastricht]: Broad Research Strategy Program Part 2 (BOS2)~~	+
-	* Transnational University Limburg (tUL)	+

AlexanderPico: adding presentation resources

AlexanderPico — Fri, 01 Apr 2016 23:13:17 GMT

adding presentation resources

←Older revision		Revision as of 23:13, 1 April 2016
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	* [http://www.slideshare.net/search/slideshow?searchfrom=header&q=wikipathways WikiPathways at SlideShare.net]		* [http://www.slideshare.net/search/slideshow?searchfrom=header&q=wikipathways WikiPathways at SlideShare.net]
	* [http://nrnb.org/showcase-wikipathways-intro.html Introductory Slides]		* [http://nrnb.org/showcase-wikipathways-intro.html Introductory Slides]
		+	* [[Image:WikiPathways_Flyer.pdf\|General purpose flyer]]
	* [http://developers.pathvisio.org/wiki/PresentationMaterial Archive of older ppt and pdf files]		* [http://developers.pathvisio.org/wiki/PresentationMaterial Archive of older ppt and pdf files]

AlexanderPico: adding presentation resources

AlexanderPico — Fri, 01 Apr 2016 23:11:50 GMT

adding presentation resources

←Older revision		Revision as of 23:11, 1 April 2016
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	* [http://figshare.com/articles/search?q=wikipathways&quick=1&x=0&y=0 WikiPathways at FigShare.com]		* [http://figshare.com/articles/search?q=wikipathways&quick=1&x=0&y=0 WikiPathways at FigShare.com]
	* [http://www.slideshare.net/search/slideshow?searchfrom=header&q=wikipathways WikiPathways at SlideShare.net]		* [http://www.slideshare.net/search/slideshow?searchfrom=header&q=wikipathways WikiPathways at SlideShare.net]
		+	* [http://nrnb.org/showcase-wikipathways-intro.html Introductory Slides]
	* [http://developers.pathvisio.org/wiki/PresentationMaterial Archive of older ppt and pdf files]		* [http://developers.pathvisio.org/wiki/PresentationMaterial Archive of older ppt and pdf files]

Khanspers: /* Funding and Support */

Khanspers — Tue, 16 Sep 2014 22:51:07 GMT

Funding and Support

←Older revision		Revision as of 22:51, 16 September 2014
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	* The BioRange program of the [http://www.nbic.nl Netherlands Bioinformatics Centre (NBIC)].		* The BioRange program of the [http://www.nbic.nl Netherlands Bioinformatics Centre (NBIC)].
	* The WikiPathways project is funded by the [http://www.nigms.nih.gov/ National Institute for General Medical Sciences] (R01-GM100039)		* The WikiPathways project is funded by the [http://www.nigms.nih.gov/ National Institute for General Medical Sciences] (R01-GM100039)
		+	* The WikiPathways project is also funded by the [http://nrnb.org National Resource for Network Biology] (P41 GM103504).
	* [http://code.google.com/soc Google Summer of Code] has supported a number of students working on WikiPathways		* [http://code.google.com/soc Google Summer of Code] has supported a number of students working on WikiPathways
	* [http://www.unimaas.nl/default.asp?taal=en University Maastricht]: Broad Research Strategy Program Part 2 (BOS2)		* [http://www.unimaas.nl/default.asp?taal=en University Maastricht]: Broad Research Strategy Program Part 2 (BOS2)
	* Transnational University Limburg (tUL)		* Transnational University Limburg (tUL)

AlexanderPico: /* WikiPathways Publications and Presentation */

AlexanderPico — Tue, 01 Apr 2014 17:19:22 GMT

WikiPathways Publications and Presentation

←Older revision		Revision as of 17:19, 1 April 2014
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	* [http://precedings.nature.com/collections/wikipathways Nature Precedings: WikiPathways Collection]		* [http://precedings.nature.com/collections/wikipathways Nature Precedings: WikiPathways Collection]
	* [http://figshare.com/articles/search?q=wikipathways&quick=1&x=0&y=0 WikiPathways at FigShare.com]		* [http://figshare.com/articles/search?q=wikipathways&quick=1&x=0&y=0 WikiPathways at FigShare.com]
		+	* [http://www.slideshare.net/search/slideshow?searchfrom=header&q=wikipathways WikiPathways at SlideShare.net]
	* [http://developers.pathvisio.org/wiki/PresentationMaterial Archive of older ppt and pdf files]		* [http://developers.pathvisio.org/wiki/PresentationMaterial Archive of older ppt and pdf files]

AlexanderPico: Adding links to publication, poster and presentation repos

AlexanderPico — Fri, 28 Mar 2014 17:38:14 GMT

Adding links to publication, poster and presentation repos

←Older revision		Revision as of 17:38, 28 March 2014
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	== How to cite WikiPathways ==		== How to cite WikiPathways ==
	{{:How to cite WikiPathways}}		{{:How to cite WikiPathways}}
		+
		+	== WikiPathways Publications and Presentation ==
		+	* [http://highwire.stanford.edu/cgi/searchresults?andorexactfulltext=and&resourcetype=1&src=ml&author1=&fulltext=wikipathways Publications using or citing WikiPathways]
		+	* [http://wikipathways.tumblr.com/ Highlighted publications using WikiPathways]
		+	* [http://precedings.nature.com/collections/wikipathways Nature Precedings: WikiPathways Collection]
		+	* [http://figshare.com/articles/search?q=wikipathways&quick=1&x=0&y=0 WikiPathways at FigShare.com]
		+	* [http://developers.pathvisio.org/wiki/PresentationMaterial Archive of older ppt and pdf files]

	== Open Access and Open Source ==		== Open Access and Open Source ==

AlexanderPico: /* Funding and Support */

AlexanderPico — Wed, 05 Sep 2012 01:06:52 GMT

Funding and Support

←Older revision		Revision as of 01:06, 5 September 2012
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	== Funding and Support ==		== Funding and Support ==
	* The BioRange program of the [http://www.nbic.nl Netherlands Bioinformatics Centre (NBIC)].		* The BioRange program of the [http://www.nbic.nl Netherlands Bioinformatics Centre (NBIC)].
-	* ~~GenMAPP.org~~ is funded by the [http://www.nigms.nih.gov/ National Institute for General Medical Sciences] (R01-~~GM080223~~)~~, as well as the [http://www.gladstone.ucsf.edu/ Gladstone Institutes]~~	+	* The WikiPathways project is funded by the [http://www.nigms.nih.gov/ National Institute for General Medical Sciences] (R01-GM100039)
	* [http://code.google.com/soc Google Summer of Code] has supported a number of students working on WikiPathways		* [http://code.google.com/soc Google Summer of Code] has supported a number of students working on WikiPathways
	* [http://www.unimaas.nl/default.asp?taal=en University Maastricht]: Broad Research Strategy Program Part 2 (BOS2)		* [http://www.unimaas.nl/default.asp?taal=en University Maastricht]: Broad Research Strategy Program Part 2 (BOS2)
	* Transnational University Limburg (tUL)		* Transnational University Limburg (tUL)