WikiPathways:Publications - Revision history

AlexanderPico: /* About WikiPathways */

2012-02-01T03:20:13Z

About WikiPathways

←Older revision		Revision as of 03:20, 1 February 2012
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	\|Kelder et al. '''Mining Biological Pathways Using WikiPathways Web Services.''' [http://www.plosone.org/article/info:doi/10.1371/journal.pone.0006447 PLoS ONE 4(7), 2009]		\|Kelder et al. '''Mining Biological Pathways Using WikiPathways Web Services.''' [http://www.plosone.org/article/info:doi/10.1371/journal.pone.0006447 PLoS ONE 4(7), 2009]
	\|This article describes the WikiPathways web service interface, with several use case examples.		\|This article describes the WikiPathways web service interface, with several use case examples.
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		+	\|Kelder et al. '''WikiPathways: Building Research Communities on Biological Pathways.''' [http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3245032/ NAR, 2012]
		+	\|Here we describe the development of WikiPathways and the community of contributors since 2008.
	\|}		\|}
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	== Selected citations ==		== Selected citations ==

AlexanderPico: Protected "WikiPathways:Publications" [edit=sysop:move=sysop]

2012-02-01T03:16:24Z

Protected "WikiPathways:Publications" [edit=sysop:move=sysop]

←Older revision

Revision as of 03:16, 1 February 2012

Khanspers at 22:34, 3 September 2010

2010-09-03T22:34:12Z

←Older revision		Revision as of 22:34, 3 September 2010
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	\|Emig et al. '''AltAnalyze and DomainGraph: analyzing and visualizing exon expression data.''' [http://nar.oxfordjournals.org/cgi/content/full/38/suppl_2/W755 Nucleic Acids Research, 2010, Vol. 38, No. suppl_2 W755-W762]		\|Emig et al. '''AltAnalyze and DomainGraph: analyzing and visualizing exon expression data.''' [http://nar.oxfordjournals.org/cgi/content/full/38/suppl_2/W755 Nucleic Acids Research, 2010, Vol. 38, No. suppl_2 W755-W762]
	\|This articles presents integrated tools for the analysis and visualization of alternative splicing data at multiple levels, including WikiPathways.		\|This articles presents integrated tools for the analysis and visualization of alternative splicing data at multiple levels, including WikiPathways.
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		+	\|Pico et al. '''SNPLogic: an interactive single nucleotide polymorphism selection, annotation, and prioritization system.''' [http://nar.oxfordjournals.org/cgi/content/full/37/suppl_1/D803 Nucleic Acids Research 2009 37(Database issue):D803-D809]
		+	\|SNPLogic provides a comprehensive SNP selection, annotation and prioritization system for design and analysis of genotyping experiments. SNPLogic integrates many different types of SNP information, including association to biological pathways.
	\|}		\|}

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	[http://highwire.stanford.edu/cgi/searchresults?andorexactfulltext=and&resourcetype=1&src=ml&author1=&fulltext=wikipathways&pubdate_year=&volume=&firstpage=&disp_type= All WikiPathways citations]		[http://highwire.stanford.edu/cgi/searchresults?andorexactfulltext=and&resourcetype=1&src=ml&author1=&fulltext=wikipathways&pubdate_year=&volume=&firstpage=&disp_type= All WikiPathways citations]

Khanspers at 22:28, 3 September 2010

2010-09-03T22:28:58Z

←Older revision		Revision as of 22:28, 3 September 2010
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	\|Jennen et al. '''Biotransformation pathway maps in WikiPathways enable direct visualization of drug metabolism related expression changes.''' [http://highwire.stanford.edu/cgi/medline/pmid;20708095? Drug Discov Today Aug 11, 2010]		\|Jennen et al. '''Biotransformation pathway maps in WikiPathways enable direct visualization of drug metabolism related expression changes.''' [http://highwire.stanford.edu/cgi/medline/pmid;20708095? Drug Discov Today Aug 11, 2010]
	\|Describes the creation of several biotransformation pathways at WikiPathways, and the visualization of microarray data on these pathways.		\|Describes the creation of several biotransformation pathways at WikiPathways, and the visualization of microarray data on these pathways.
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	\|Emig et al. '''AltAnalyze and DomainGraph: analyzing and visualizing exon expression data.''' [http://nar.oxfordjournals.org/cgi/content/full/38/suppl_2/W755 Nucleic Acids Research, 2010, Vol. 38, No. suppl_2 W755-W762]		\|Emig et al. '''AltAnalyze and DomainGraph: analyzing and visualizing exon expression data.''' [http://nar.oxfordjournals.org/cgi/content/full/38/suppl_2/W755 Nucleic Acids Research, 2010, Vol. 38, No. suppl_2 W755-W762]
	\|This articles presents integrated tools for the analysis and visualization of alternative splicing data at multiple levels, including WikiPathways.		\|This articles presents integrated tools for the analysis and visualization of alternative splicing data at multiple levels, including WikiPathways.

Khanspers at 22:28, 3 September 2010

2010-09-03T22:28:14Z

←Older revision		Revision as of 22:28, 3 September 2010
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	\|Jennen et al. '''Biotransformation pathway maps in WikiPathways enable direct visualization of drug metabolism related expression changes.''' [http://highwire.stanford.edu/cgi/medline/pmid;20708095? Drug Discov Today Aug 11, 2010]		\|Jennen et al. '''Biotransformation pathway maps in WikiPathways enable direct visualization of drug metabolism related expression changes.''' [http://highwire.stanford.edu/cgi/medline/pmid;20708095? Drug Discov Today Aug 11, 2010]
-	\|~~This article describes~~ the creation of several biotransformation pathways at WikiPathways, and the visualization of microarray data on these pathways.	+	\|Describes the creation of several biotransformation pathways at WikiPathways, and the visualization of microarray data on these pathways.
-	\|-	+	\|Emig et al. '''AltAnalyze and DomainGraph: analyzing and visualizing exon expression data.''' [http://nar.oxfordjournals.org/cgi/content/full/38/suppl_2/W755 Nucleic Acids Research, 2010, Vol. 38, No. suppl_2 W755-W762]
		+	\|This articles presents integrated tools for the analysis and visualization of alternative splicing data at multiple levels, including WikiPathways.
	\|}		\|}

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	[http://highwire.stanford.edu/cgi/searchresults?andorexactfulltext=and&resourcetype=1&src=ml&author1=&fulltext=wikipathways&pubdate_year=&volume=&firstpage=&disp_type= All WikiPathways citations]		[http://highwire.stanford.edu/cgi/searchresults?andorexactfulltext=and&resourcetype=1&src=ml&author1=&fulltext=wikipathways&pubdate_year=&volume=&firstpage=&disp_type= All WikiPathways citations]

AlexanderPico at 21:41, 2 September 2010

2010-09-02T21:41:31Z

←Older revision		Revision as of 21:41, 2 September 2010
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-	== Selected ~~Citations~~ ==	+	== Selected citations ==

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AlexanderPico at 21:41, 2 September 2010

2010-09-02T21:41:13Z

←Older revision		Revision as of 21:41, 2 September 2010
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-	== Selected ~~citations of WikiPathways~~ ==	+	== Selected Citations ==

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AlexanderPico at 21:37, 2 September 2010

2010-09-02T21:37:48Z

←Older revision		Revision as of 21:37, 2 September 2010
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	__NOTOC__		__NOTOC__

-	This page lists publications about WikiPathways and publications citing WikiPathways. To see all publications citing WikiPathways, visit [http://highwire.stanford.edu/cgi/searchresults?andorexactfulltext=~~and&resourcetype~~=~~1&src=ml&author1=&fulltext=wikipathways&pubdate_year=&volume=&firstpage=&disp_type= Highwire]~~	+	== About WikiPathways ==
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-	~~== Publications about~~ WikiPathways ==	+

	{\| border = "0"		{\| border = "0"
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-	\|Pico et al. '''WikiPathways: Pathway Editing for the People.''' ~~PLoS Biol 6(7) 2008.~~ [http://0-dx.doi.org.ilsprod.lib.neu.edu/10.1371/journal.pbio.0060184 ~~doi:10.1371/journal.pbio.0060184~~]	+	\|Pico et al. '''WikiPathways: Pathway Editing for the People.''' [http://0-dx.doi.org.ilsprod.lib.neu.edu/10.1371/journal.pbio.0060184 PLoS Biol 6(7) 2008]
-	\|The first article ~~describing~~ WikiPathways and wiki-based pathway editing.	+	\|The first article introducing WikiPathways and wiki-based pathway editing.
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	\|-		\|-
-	\|Kelder et al. '''Mining Biological Pathways Using WikiPathways Web Services.''' ~~PLoS ONE 4(7), 2009.~~ [http://www.plosone.org/article/info:doi/10.1371/journal.pone.0006447 ~~doi:10.1371/journal.pone.0006447~~]	+	\|Kelder et al. '''Mining Biological Pathways Using WikiPathways Web Services.''' [http://www.plosone.org/article/info:doi/10.1371/journal.pone.0006447 PLoS ONE 4(7), 2009]
	\|This article describes the WikiPathways web service interface, with several use case examples.		\|This article describes the WikiPathways web service interface, with several use case examples.
	\|}		\|}

-	== ~~Publications citing~~ WikiPathways ==	+
		+	== Selected citations of WikiPathways ==

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		+	[http://highwire.stanford.edu/cgi/searchresults?andorexactfulltext=and&resourcetype=1&src=ml&author1=&fulltext=wikipathways&pubdate_year=&volume=&firstpage=&disp_type= All WikiPathways citations]

Khanspers at 19:26, 2 September 2010

2010-09-02T19:26:11Z

←Older revision		Revision as of 19:26, 2 September 2010
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	\|Pico et al. '''WikiPathways: Pathway Editing for the People.''' PLoS Biol 6(7) 2008. [http://0-dx.doi.org.ilsprod.lib.neu.edu/10.1371/journal.pbio.0060184 doi:10.1371/journal.pbio.0060184]		\|Pico et al. '''WikiPathways: Pathway Editing for the People.''' PLoS Biol 6(7) 2008. [http://0-dx.doi.org.ilsprod.lib.neu.edu/10.1371/journal.pbio.0060184 doi:10.1371/journal.pbio.0060184]
-	\|~~This is the~~ first article describing WikiPathways and wiki-based pathway editing.	+	\|The first article describing WikiPathways and wiki-based pathway editing.
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	== Publications citing WikiPathways ==		== Publications citing WikiPathways ==
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		+	{\| border = "0"
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		+	\|Jennen et al. '''Biotransformation pathway maps in WikiPathways enable direct visualization of drug metabolism related expression changes.''' [http://highwire.stanford.edu/cgi/medline/pmid;20708095? Drug Discov Today Aug 11, 2010]
		+	\|This article describes the creation of several biotransformation pathways at WikiPathways, and the visualization of microarray data on these pathways.
		+	\|-
		+	\|}

Khanspers: New page: NOTOC This page lists publications about WikiPathways and publications citing WikiPathways. To see all publications citing WikiPathways, visit [http://highwire.stanford.edu/cgi/search...

2010-09-02T19:17:03Z

New page: __NOTOC__ This page lists publications about WikiPathways and publications citing WikiPathways. To see all publications citing WikiPathways, visit [http://highwire.stanford.edu/cgi/search...

New page

__NOTOC__

This page lists publications about WikiPathways and publications citing WikiPathways. To see all publications citing WikiPathways, visit [http://highwire.stanford.edu/cgi/searchresults?andorexactfulltext=and&resourcetype=1&src=ml&author1=&fulltext=wikipathways&pubdate_year=&volume=&firstpage=&disp_type= Highwire]

== Publications about WikiPathways ==

{| border = "0"
|-
|Pico et al. '''WikiPathways: Pathway Editing for the People.''' PLoS Biol 6(7) 2008. [http://0-dx.doi.org.ilsprod.lib.neu.edu/10.1371/journal.pbio.0060184 doi:10.1371/journal.pbio.0060184]
|This is the first article describing WikiPathways and wiki-based pathway editing.
|-
|
|-
|Kelder et al. '''Mining Biological Pathways Using WikiPathways Web Services.''' PLoS ONE 4(7), 2009. [http://www.plosone.org/article/info:doi/10.1371/journal.pone.0006447 doi:10.1371/journal.pone.0006447]
|This article describes the WikiPathways web service interface, with several use case examples.
|}

== Publications citing WikiPathways ==

WikiPathways:Publications - Revision history

AlexanderPico: /* About WikiPathways */

AlexanderPico: Protected "WikiPathways:Publications" [edit=sysop:move=sysop]

Khanspers at 22:34, 3 September 2010

Khanspers at 22:28, 3 September 2010

Khanspers at 22:28, 3 September 2010

AlexanderPico at 21:41, 2 September 2010

AlexanderPico at 21:41, 2 September 2010

AlexanderPico at 21:37, 2 September 2010

Khanspers at 19:26, 2 September 2010

Khanspers: New page: __NOTOC__ This page lists publications about WikiPathways and publications citing WikiPathways. To see all publications citing WikiPathways, visit [http://highwire.stanford.edu/cgi/search...

Khanspers: New page: NOTOC This page lists publications about WikiPathways and publications citing WikiPathways. To see all publications citing WikiPathways, visit [http://highwire.stanford.edu/cgi/search...